BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029A03LP1|AL428991
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig306 1703 0.0
>3x_Contig306
Length = 1258
Score = 1703 bits (853), Expect = 0.0
Identities = 886/901 (98%), Gaps = 2/901 (0%)
Strand = Plus / Minus
Query: 1 gaggctgccaaaagtgcagtactggcaacagaactaaacttcattgtttgtatgatgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaggctgccaaaagtgcagtactggcaacagaactaaacttcattgtttgtatgatgttc 842
Query: 61 ttaagttcttgttattttctttaaactaaaacacaaaaaggagagtaaaatagttggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttaagttcttgttattttctttaaactaaaacacaaaaaggagagtaaaatagttggtgt 782
Query: 121 aatagcaaagtatctttatcttatacgatcaacccgaaataatataggaatgaacgtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aatagcaaagtatctttatcttatacgatcaacccgaaataatataggaatgaacgtaaa 722
Query: 181 gacaatctgtggagaaaaaaggagtgtaagcgttttcaaacgatattttgagcgatcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gacaatctgtggagaaaaaaggagtgtaagcgttttcaaacgatattttgagcgatcttt 662
Query: 241 atttctaaaataaaggttttaatatcaaataaggaaggaatagaagttggtttaataact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atttctaaaataaaggttttaatatcaaataaggaaggaatagaagttggtttaataact 602
Query: 301 gaaaactgcgccaaaatgaaatataaaattaagatctgtacagtttctgtcgctctgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaaaactgcgccaaaatgaaatataaaattaagatctgtacagtttctgtcgctctgagc 542
Query: 361 tctggtagagattataaggratggaaaggktgggggkttgagttaatggtaaataagtaa 420
||||||||||||||||||| ||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 541 tctggtagagattataaggaatggaaaggttgggggtttgagtaaatggtaaataagtaa 482
Query: 421 agactactgaatattaagagggagaaggktaaatcagaaaaaaaatgacatgatgaattc 480
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 481 agactactgaatattaagaggaagaaggttaaatcagaaaaaaaatgacatgatgaattc 422
Query: 481 atataaacaattaaattgaaccaagcacgaaaaataatgcaaacaaaagattgaaaaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atataaacaattaaattgaaccaagcacgaaaaataatgcaaacaaaagattgaaaaagt 362
Query: 541 ataaagaaagagtggstgagcaaagccagatgragcgaaaaagatggtaaaccagttctg 600
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 ataaagaaagagtggctgagcaaagccagatgaagcgaaaaagatggtaaaccagttctg 302
Query: 601 aactttgggraacttgagataaaaaccacgatttttataaaaacatgaaaaagtgattga 660
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aactttgggaaacttgagataaaaaccacgatttttataaaaacatgaaaaagtgattga 242
Query: 661 attaggraactactggtttgagggtcgttattatttcctattttgaaacaaatctgaaaa 720
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 241 attaggaaactactggtttgaggatcgttattatttcctattttgaaacaaatctgaaaa 182
Query: 721 gaaaaggktcagttcggtctggta-ccgttcccgtcatcaagatgaagaacgtagcgtac 779
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaaaggttcagttcggtctggtacccgttcccgtcatcaagatgaagaacgtagcgtac 122
Query: 780 aaagggrcgggtttcgggtatggattatggtcccgttatcgtgtctcgaggggtgtttca 839
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 121 aaagggacgggtttcgggtatggattatggtcccgttatcgtgtctcga-gggtgtttca 63
Query: 840 gttacgatggctgtgtttctttccttttttttttgctgattttatttcctactcttcaac 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gttacgatggctgtgtttctttccttttttttttgctgattttatttcctactcttcaac 3
Query: 900 t 900
|
Sbjct: 2 t 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9572
Number of Sequences: 1807
Number of extensions: 9572
Number of successful extensions: 85
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)